ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 202.00 11.71 0.73 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1121.00 0.49 4.08 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 140074.00 60.94 509.50 92.49 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 82.00 21.13 0.30 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 5.00 0.72 0.02 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 109.00 0.33 0.40 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 25.00 0.48 0.09 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 93.00 1.77 0.34 39.41 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 82.00 1.56 0.30 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 21.00 0.40 0.08 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 111.00 2.12 0.40 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 413.00 7.87 1.50 88.25 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 1110.00 13.79 4.04 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 2748.00 34.15 10.00 50.9 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 557.00 7.54 2.03 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 7151.00 78.82 26.01 95.02 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 63.00 0.69 0.23 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 78.00 0.86 0.28 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 88.00 0.97 0.32 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 151.00 1.66 0.55 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 403.00 5.59 1.47 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 1990.00 45.73 7.24 89.52 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 90.00 1.35 0.33 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 371.00 21.86 1.35 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 157.00 9.25 0.57 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA sigmoid colon (Tissue)