ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 242.00 36.56 0.88 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 156.00 6.51 0.57 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 591.00 40.12 2.15 67.31 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 98.00 0.10 0.36 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 3.00 16.67 0.01 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 304.00 9.29 1.11 91.29 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 44.00 1.34 0.16 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 682.00 20.84 2.48 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 1573.00 55.15 5.72 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 33.00 0.01 0.12 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 293.00 0.13 1.07 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 2734.00 1.19 9.94 84.33 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 61.00 0.03 0.22 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 194.00 0.08 0.71 82.2 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 57822.00 25.13 210.32 50.01 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 181.00 61.99 0.66 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 990.00 0.29 3.60 97.92 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 560.00 44.03 2.04 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 91.00 7.15 0.33 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 293.00 23.52 1.07 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 54.00 0.75 0.20 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 151.00 0.04 0.55 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 166.00 0.05 0.60 13.83 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 997.00 36.37 3.63 72.04 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 641.00 23.39 2.33 39.13 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA sigmoid colon (Tissue)