ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 82.00 0.79 0.43 51.9 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 2344.00 22.50 12.34 100.0 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 22418.00 71.87 118.00 90.44 SNHG26-250 lncRNA transverse colon (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 2347.00 7.52 12.35 87.28 SNHG26-250 lncRNA transverse colon (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 80.00 6.12 0.42 100.0 LINC02422-207 lncRNA transverse colon (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 340.00 3.86 1.79 100.0 ENST00000753088 lncRNA transverse colon (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 776.00 8.82 4.08 100.0 ENST00000753088 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 2224.17 3.67 11.71 36.62 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 881.00 1.46 4.64 100.0 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 605.00 1.00 3.18 100.0 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 116.00 0.19 0.61 100.0 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 17987.89 29.72 94.68 55.0 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 16069.49 26.55 84.58 46.17 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 1081.86 1.79 5.69 29.97 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 1676.28 2.77 8.82 52.91 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 9390.00 15.51 49.43 100.0 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 2956.56 4.88 15.56 69.32 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 15.00 5.26 0.08 100.0 ENST00000756452 lncRNA transverse colon (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 2996.00 33.32 15.77 100.0 ENST00000760093 lncRNA transverse colon (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 898.00 9.99 4.73 100.0 ENST00000760093 lncRNA transverse colon (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 718.00 50.46 3.78 80.04 SNHG14-356 lncRNA transverse colon (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 69635.00 26.52 366.54 82.93 LINC02806-241 lncRNA transverse colon (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 158.00 0.06 0.83 100.0 LINC02806-241 lncRNA transverse colon (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 9.00 0.00 0.05 100.0 LINC02806-241 lncRNA transverse colon (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 151985.00 57.88 800.00 83.14 LINC02806-241 lncRNA transverse colon (Tissue)