ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000762395.1 ENST00000762395.1_307_324_+ 307–324 28.00 0.01 0.15 100.0 LINC02806-241 lncRNA transverse colon (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 831.00 96.40 4.37 100.0 EHBP1-AS1-210 lncRNA transverse colon (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 677.00 14.08 3.56 100.0 ENST00000770398 lncRNA transverse colon (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 63.00 1.31 0.33 100.0 ENST00000770398 lncRNA transverse colon (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 3436.00 71.48 18.09 100.0 ENST00000770398 lncRNA transverse colon (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 549.00 0.29 2.89 100.0 ENST00000771298 lncRNA transverse colon (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 2594.00 1.38 13.65 100.0 ENST00000771298 lncRNA transverse colon (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 175050.00 93.12 921.41 97.54 ENST00000771298 lncRNA transverse colon (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 181.00 0.10 0.95 100.0 ENST00000771298 lncRNA transverse colon (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 473.00 55.71 2.49 100.0 ENST00000772672 lncRNA transverse colon (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 33.00 3.89 0.17 100.0 ENST00000772672 lncRNA transverse colon (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 638.00 21.07 3.36 100.0 ENST00000773843 lncRNA transverse colon (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 43.00 0.01 0.23 100.0 SNHG12-223 lncRNA transverse colon (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 181103.00 39.31 953.27 86.7 SNHG12-223 lncRNA transverse colon (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 277400.00 60.21 1460.15 98.77 SNHG12-223 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 16559.00 2.66 87.16 100.0 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 571424.00 91.65 3007.80 95.58 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 92.00 0.01 0.48 100.0 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 81.57 0.01 0.43 43.62 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 88.14 0.01 0.46 41.38 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 119.67 0.02 0.63 36.82 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 3049.00 0.49 16.05 70.01 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 105.00 0.02 0.55 100.0 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 5.00 12.50 0.03 100.0 ENST00000778783 lncRNA transverse colon (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 1826.00 87.70 9.61 90.04 MIR155HG-205 lncRNA transverse colon (Tissue)