ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 180333.00 96.20 949.22 100.0 LINC01962-202 lncRNA transverse colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 743.00 0.40 3.91 100.0 LINC01962-202 lncRNA transverse colon (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 1834.00 60.75 9.65 97.29 SNHG14-241 lncRNA transverse colon (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 4260.00 95.26 22.42 100.0 MEG8-228 lncRNA transverse colon (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 276.00 28.25 1.45 100.0 SNHG14-254 lncRNA transverse colon (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 38.00 3.14 0.20 100.0 SNHG14-261 lncRNA transverse colon (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 477.00 39.36 2.51 87.2 SNHG14-261 lncRNA transverse colon (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 6071.00 52.42 31.96 100.0 LIMD1-AS1-204 lncRNA transverse colon (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 59.00 0.51 0.31 100.0 LIMD1-AS1-204 lncRNA transverse colon (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 985.00 8.51 5.18 96.29 LIMD1-AS1-204 lncRNA transverse colon (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 2974.00 63.70 15.65 85.98 MIR99AHG-262 lncRNA transverse colon (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 781.00 16.73 4.11 100.0 MIR99AHG-262 lncRNA transverse colon (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 38.00 58.46 0.20 100.0 SNHG14-270 lncRNA transverse colon (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 57.00 4.47 0.30 100.0 SNHG14-275 lncRNA transverse colon (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 150.00 78.95 0.79 95.54 MIR9-2HG-225 lncRNA transverse colon (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 647.00 63.06 3.41 100.0 MEG8-233 lncRNA transverse colon (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 65.00 6.34 0.34 100.0 MEG8-233 lncRNA transverse colon (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 259.00 13.19 1.36 100.0 SNHG14-278 lncRNA transverse colon (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 693.00 35.29 3.65 73.88 SNHG14-278 lncRNA transverse colon (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 169.00 30.07 0.89 100.0 MEG8-234 lncRNA transverse colon (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 102.00 18.15 0.54 100.0 MEG8-234 lncRNA transverse colon (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 1358.00 80.98 7.15 100.0 SNHG17-252 lncRNA transverse colon (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 487.00 15.30 2.56 62.36 SNHG14-288 lncRNA transverse colon (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 2329.00 73.17 12.26 94.56 SNHG14-288 lncRNA transverse colon (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 6.00 14.29 0.03 100.0 SNHG14-295 lncRNA transverse colon (Tissue)