ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 1.00 50.00 0.01 100.0 MIR653-201 miRNA transverse colon (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 4105.00 80.90 21.61 100.0 MIR140-201 miRNA transverse colon (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 317.00 45.48 1.67 70.92 MIR106B-201 miRNA transverse colon (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 17.00 2.44 0.09 100.0 MIR106B-201 miRNA transverse colon (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 44302.00 62.35 233.19 98.31 SNORD83A-201 snoRNA transverse colon (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 24711.00 34.78 130.07 94.34 SNORD83A-201 snoRNA transverse colon (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 375.00 64.66 1.97 100.0 SNORD41-201 snoRNA transverse colon (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 1577.00 29.70 8.30 87.13 MT-TF-201 Mt tRNA transverse colon (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 359.00 6.76 1.89 46.68 MT-TF-201 Mt tRNA transverse colon (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 244.00 4.60 1.28 100.0 MT-TF-201 Mt tRNA transverse colon (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 297.00 24.55 1.56 100.0 MT-TV-201 Mt tRNA transverse colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 68.00 0.70 0.36 100.0 MT-RNR2-201 Mt rRNA transverse colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 79.00 0.81 0.42 100.0 MT-RNR2-201 Mt rRNA transverse colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 530.00 5.44 2.79 81.04 MT-RNR2-201 Mt rRNA transverse colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 702.00 7.21 3.70 90.82 MT-RNR2-201 Mt rRNA transverse colon (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 207.00 2.13 1.09 100.0 MT-RNR2-201 Mt rRNA transverse colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 428.00 4.40 2.25 100.0 MT-RNR2-201 Mt rRNA transverse colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 69.00 0.71 0.36 100.0 MT-RNR2-201 Mt rRNA transverse colon (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 143.00 40.06 0.75 97.28 MT-TI-201 Mt tRNA transverse colon (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 50.00 14.01 0.26 100.0 MT-TI-201 Mt tRNA transverse colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 1789.52 10.41 9.42 46.75 MT-TQ-201 Mt tRNA transverse colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 895.00 5.21 4.71 100.0 MT-TQ-201 Mt tRNA transverse colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 7785.00 45.29 40.98 88.82 MT-TQ-201 Mt tRNA transverse colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 1552.54 9.03 8.17 59.97 MT-TQ-201 Mt tRNA transverse colon (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 2960.00 42.47 15.58 61.32 MT-TM-201 Mt tRNA transverse colon (Tissue)