ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 2960.00 42.47 15.58 61.32 MT-TM-201 Mt tRNA transverse colon (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 84.00 17.39 0.44 100.0 MT-TC-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 13177.00 38.20 69.36 100.0 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 635.00 1.84 3.34 100.0 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 1113.00 3.23 5.86 100.0 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 8129.00 23.57 42.79 86.03 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 232.00 0.67 1.22 100.0 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 6311.00 18.30 33.22 77.9 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 54.00 52.94 0.28 100.0 MT-TD-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 139.00 0.22 0.73 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 59292.00 91.77 312.09 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 2015.00 3.12 10.61 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 131.00 0.20 0.69 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 227.00 13.21 1.19 100.0 MT-TS2-201 Mt tRNA transverse colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 57.00 3.32 0.30 100.0 MT-TS2-201 Mt tRNA transverse colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 636.00 37.02 3.35 89.7 MT-TS2-201 Mt tRNA transverse colon (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 393.00 39.03 2.07 100.0 MT-TL2-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 298.00 0.13 1.57 100.0 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 193820.00 87.80 1020.21 94.37 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 610.00 0.28 3.21 100.0 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 449.00 0.20 2.36 100.0 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 1911.00 0.87 10.06 87.62 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 370.00 0.17 1.95 62.93 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 218.00 0.10 1.15 47.91 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 999.00 54.86 5.26 100.0 MIR196A1-201 miRNA transverse colon (Tissue)