ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 3944.00 7.72 20.76 100.0 MIR30A-201 miRNA transverse colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 101.00 0.20 0.53 100.0 MIR30A-201 miRNA transverse colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 3628.00 7.10 19.10 67.05 MIR30A-201 miRNA transverse colon (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 55434.00 89.47 291.79 93.51 MIR27B-201 miRNA transverse colon (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 638.00 1.03 3.36 100.0 MIR27B-201 miRNA transverse colon (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 2082.00 87.33 10.96 100.0 MIR196A2-201 miRNA transverse colon (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 95.00 94.06 0.50 100.0 MIR577-201 miRNA transverse colon (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 60.00 56.07 0.32 80.0 MIR654-201 miRNA transverse colon (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 115.00 98.29 0.61 98.29 MIR204-201 miRNA transverse colon (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 1502.00 93.76 7.91 100.0 MIR152-201 miRNA transverse colon (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 12.00 46.15 0.06 100.0 MIR138-1-201 miRNA transverse colon (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 1244.00 88.98 6.55 100.0 MIR30C1-201 miRNA transverse colon (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 133.00 85.81 0.70 100.0 MIR660-201 miRNA transverse colon (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 391.00 9.36 2.06 100.0 MIR125B1-201 miRNA transverse colon (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 2964.00 70.94 15.60 85.94 MIR125B1-201 miRNA transverse colon (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 28.00 60.87 0.15 100.0 MIR493-201 miRNA transverse colon (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 13.00 28.26 0.07 100.0 MIR493-201 miRNA transverse colon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 6308.02 15.01 33.20 19.61 MIR182-201 miRNA transverse colon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 27640.14 65.78 145.49 69.73 MIR182-201 miRNA transverse colon (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 5241.00 86.69 27.59 91.72 MIR100-201 miRNA transverse colon (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 62.00 96.88 0.33 100.0 MIR301A-201 miRNA transverse colon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 5423.00 93.21 28.54 97.0 MIR130A-201 miRNA transverse colon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 365.00 6.27 1.92 53.13 MIR130A-201 miRNA transverse colon (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 75769.00 98.25 398.82 98.98 MIRLET7F2-201 miRNA transverse colon (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 199.00 81.89 1.05 100.0 MIR652-201 miRNA transverse colon (Tissue)