ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 81581.00 87.75 429.42 91.76 MIR28-201 miRNA transverse colon (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 1983.00 2.13 10.44 89.89 MIR28-201 miRNA transverse colon (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 141.00 64.68 0.74 100.0 MIR183-201 miRNA transverse colon (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 18360.00 85.72 96.64 100.0 MIR145-201 miRNA transverse colon (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 689.00 3.22 3.63 100.0 MIR145-201 miRNA transverse colon (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 5639.00 96.49 29.68 98.05 MIR186-201 miRNA transverse colon (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 5118.00 86.05 26.94 100.0 MIR200B-201 miRNA transverse colon (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 49.00 44.55 0.26 100.0 MIR218-1-201 miRNA transverse colon (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 20405.00 91.97 107.41 95.76 MIR181B2-201 miRNA transverse colon (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 4.00 57.14 0.02 100.0 MIR495-201 miRNA transverse colon (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 2168450.00 89.11 11414.04 89.59 MIR10B-201 miRNA transverse colon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 178.88 55.21 0.94 61.05 MIR130B-201 miRNA transverse colon (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 18.00 5.56 0.09 100.0 MIR130B-201 miRNA transverse colon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 78.51 24.23 0.41 59.48 MIR130B-201 miRNA transverse colon (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 4609.00 43.15 24.26 100.0 MIR199A1-201 miRNA transverse colon (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 13.00 72.22 0.07 100.0 MIR487B-201 miRNA transverse colon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 1010.87 73.68 5.32 77.28 MIR93-201 miRNA transverse colon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 226.38 16.50 1.19 19.93 MIR93-201 miRNA transverse colon (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 819.00 81.33 4.31 89.02 MIR532-201 miRNA transverse colon (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 56.00 82.35 0.29 100.0 MIR15B-201 miRNA transverse colon (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 397.00 75.33 2.09 100.0 MIR150-201 miRNA transverse colon (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 24.00 45.28 0.13 100.0 MIR542-201 miRNA transverse colon (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 26.00 5.56 0.14 100.0 MIR500A-201 miRNA transverse colon (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 365.00 77.99 1.92 100.0 MIR500A-201 miRNA transverse colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 3628.00 7.10 19.10 67.05 MIR30A-201 miRNA transverse colon (Tissue)