ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 180.00 0.13 1.33 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 759.00 0.55 5.61 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 3815.00 2.76 28.22 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 36.00 0.03 0.27 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 347.91 0.25 2.57 65.03 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 118.00 0.09 0.87 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 6346.77 4.59 46.95 36.53 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 516.00 0.37 3.82 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 454.00 51.13 3.36 100.0 SNORD114-9-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 310.00 34.91 2.29 100.0 SNORD114-9-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 2097.00 18.73 15.51 100.0 Y_RNA.234-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 42.00 2.49 0.31 100.0 RNA5SP141-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 48.00 80.00 0.36 100.0 SNORD114-15-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 54.00 17.76 0.40 100.0 ENST00000364722 snoRNA upper lobe of left lung (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 18.00 30.51 0.13 100.0 SNORD113-3-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 5322.00 69.76 39.37 100.0 SNORD52-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 150.00 20.55 1.11 100.0 SNORD114-3-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 487.00 66.71 3.60 100.0 SNORD114-3-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 13.00 1.78 0.10 100.0 SNORD114-3-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 37.00 4.02 0.27 100.0 RNA5SP298-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 121.00 72.02 0.90 100.0 SNORD113-9-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 3974.00 8.43 29.40 100.0 SNORD38A-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 859.00 1.82 6.35 100.0 SNORD38A-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 39404.00 83.63 291.49 100.0 SNORD38A-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 1035.00 85.54 7.66 97.37 SNORD114-20-201 snoRNA upper lobe of left lung (Tissue)