ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 745.87 3.07 5.52 58.92 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 2671.00 10.98 19.76 72.05 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 2674.00 11.00 19.78 60.59 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 2747.00 11.30 20.32 63.16 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 116.00 84.06 0.86 100.0 SNORD114-14-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 257.00 0.39 1.90 100.0 SNORD104-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 3571.00 5.37 26.42 100.0 SNORD104-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 74541.00 60.79 551.41 68.74 RNA5SP358-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 104.00 5.12 0.77 73.76 RNA5SP145-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 4.00 14.29 0.03 100.0 Y_RNA.105-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 12.00 3.52 0.09 100.0 RNY4P9-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 780.00 14.08 5.77 100.0 RNU5B-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1756.00 31.71 12.99 100.0 RNU5B-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 31.00 0.56 0.23 100.0 RNU5B-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 69.00 5.38 0.51 100.0 RNY4P27-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 3.00 0.23 0.02 100.0 RNY4P27-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 264.00 15.15 1.95 100.0 Y_RNA.136-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 1139.00 92.15 8.43 98.44 SNORD114-25-201 snoRNA upper lobe of left lung (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 251.00 91.94 1.86 100.0 SNORD113-7-201 snoRNA upper lobe of left lung (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 119.00 21.83 0.88 100.0 Y_RNA.181-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 656.00 13.74 4.85 100.0 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 1014.20 21.24 7.50 60.91 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 494.60 10.36 3.66 42.6 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 531.00 11.12 3.93 100.0 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 6346.77 4.59 46.95 36.53 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)