ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 30.00 0.23 0.14 48.39 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 73.00 0.57 0.34 73.0 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 6774.00 52.69 31.55 84.38 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 32.00 0.25 0.15 51.61 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 2593.00 20.17 12.08 61.71 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 101.00 0.79 0.47 100.0 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 697.00 5.42 3.25 100.0 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 57.00 0.44 0.27 100.0 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 4837.00 3.48 22.53 83.54 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 436.00 0.31 2.03 83.05 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 184.00 0.13 0.86 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1273.00 0.92 5.93 55.59 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 9.00 0.01 0.04 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 34.00 0.02 0.16 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 357.00 0.26 1.66 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 4560.00 3.28 21.24 8.65 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 745.00 0.54 3.47 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 116332.00 83.68 541.82 93.65 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 550.00 0.88 2.56 100.0 MIRLET7A1HG-203 lncRNA sigmoid colon (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 74.00 85.06 0.34 100.0 MEG8-225 lncRNA sigmoid colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 318.00 55.69 1.48 100.0 SNHG29-232 lncRNA sigmoid colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 119.00 20.84 0.55 100.0 SNHG29-232 lncRNA sigmoid colon (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 36.00 5.66 0.17 100.0 SNHG14-234 lncRNA sigmoid colon (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 8.00 1.26 0.04 100.0 SNHG14-234 lncRNA sigmoid colon (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 415.00 12.91 1.93 100.0 ENST00000655317 lncRNA sigmoid colon (Tissue)