ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 1980.75 30.72 9.23 38.74 RNA5-8SN2-201 rRNA sigmoid colon (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 178.00 2.76 0.83 100.0 RNA5-8SN2-201 rRNA sigmoid colon (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 3001.06 46.54 13.98 58.69 RNA5-8SN2-201 rRNA sigmoid colon (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 94.00 0.40 0.44 100.0 U2.3-201 snRNA sigmoid colon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 6477.00 27.35 30.17 55.73 U2.3-201 snRNA sigmoid colon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 3091.00 13.05 14.40 100.0 U2.3-201 snRNA sigmoid colon (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 495.00 2.09 2.31 100.0 U2.3-201 snRNA sigmoid colon (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 415.00 1.75 1.93 100.0 U2.3-201 snRNA sigmoid colon (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 173.00 0.74 0.81 100.0 U2.6-201 snRNA sigmoid colon (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 21.00 0.31 0.10 21.43 ENST00000619323 lncRNA sigmoid colon (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 6397.00 95.72 29.79 98.16 ENST00000619323 lncRNA sigmoid colon (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 21.00 18.58 0.10 100.0 SCARNA4-202 scaRNA sigmoid colon (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 79.00 81.44 0.37 100.0 ENST00000625572 miRNA sigmoid colon (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 198.00 92.52 0.92 100.0 ENST00000630615 snoRNA sigmoid colon (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 84.00 27.27 0.39 100.0 DMRT2-209 protein coding sigmoid colon (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 13.00 4.22 0.06 100.0 DMRT2-209 protein coding sigmoid colon (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 74.00 33.64 0.34 100.0 SNORD98-201 snoRNA sigmoid colon (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 87.00 39.55 0.41 100.0 SNORD98-201 snoRNA sigmoid colon (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 7320.30 60.14 34.09 63.51 MIR106AHG-201 lncRNA sigmoid colon (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 24.23 0.20 0.11 53.85 MIR106AHG-201 lncRNA sigmoid colon (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 18.74 0.15 0.09 41.65 MIR106AHG-201 lncRNA sigmoid colon (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 19.00 42.22 0.09 100.0 MEG8-222 lncRNA sigmoid colon (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 21.00 46.67 0.10 100.0 MEG8-222 lncRNA sigmoid colon (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 2.00 0.34 0.01 100.0 SNHG14-224 lncRNA sigmoid colon (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 183.00 31.39 0.85 78.21 SNHG14-224 lncRNA sigmoid colon (Tissue)