ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 85.00 14.58 0.40 91.4 SNHG14-224 lncRNA sigmoid colon (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 1053.33 6.02 4.91 48.38 5S_rRNA.20-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 70.00 3.97 0.33 100.0 HSPA9-211 retained intron sigmoid colon (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 771.00 43.68 3.59 66.58 HSPA9-211 retained intron sigmoid colon (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 931.00 55.78 4.34 100.0 DNM3OS-205 lncRNA sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 157.00 0.39 0.73 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 37.00 0.09 0.17 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 310.00 0.77 1.44 91.18 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 63.00 0.16 0.29 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 41.00 0.10 0.19 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 22247.00 55.14 103.62 99.88 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 44.00 0.11 0.20 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 634.00 1.57 2.95 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 68.00 0.17 0.32 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 18.00 0.04 0.08 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 195.00 0.48 0.91 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 22.00 0.05 0.10 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 128.00 0.32 0.60 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 450.00 1.12 2.10 82.42 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 270.00 0.67 1.26 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 20.00 0.05 0.09 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 300.00 0.74 1.40 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 14126.00 35.01 65.79 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 13.00 6.74 0.06 100.0 FTX-219 lncRNA sigmoid colon (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 100.00 51.81 0.47 91.74 FTX-219 lncRNA sigmoid colon (Tissue)