ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 50.00 70.42 0.23 100.0 ENST00000578036 lncRNA sigmoid colon (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 69.00 84.15 0.32 100.0 RPL23A-207 protein coding sigmoid colon (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 69.00 87.34 0.32 100.0 MIR744-201 miRNA sigmoid colon (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 80.00 53.33 0.37 100.0 MIR378C-201 miRNA sigmoid colon (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 68.00 69.39 0.32 71.58 MIR142HG-201 lncRNA sigmoid colon (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 2.00 2.04 0.01 4.88 MIR142HG-201 lncRNA sigmoid colon (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 23.28 0.05 0.11 83.14 RPL23A-208 retained intron sigmoid colon (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 14.99 0.03 0.07 74.93 RPL23A-208 retained intron sigmoid colon (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 44793.00 88.33 208.63 93.41 RPL23A-208 retained intron sigmoid colon (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 5570.00 10.98 25.94 88.26 RPL23A-208 retained intron sigmoid colon (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 8.00 1.18 0.04 100.0 MIR133A1HG-202 lncRNA sigmoid colon (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 405.00 3.94 1.89 62.31 RPL17-211 retained intron sigmoid colon (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 986.00 9.59 4.59 36.59 RPL17-211 retained intron sigmoid colon (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 53.00 0.52 0.25 100.0 RPL17-211 retained intron sigmoid colon (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 7199.00 70.05 33.53 97.26 RPL17-211 retained intron sigmoid colon (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 1198.00 11.66 5.58 94.63 RPL17-211 retained intron sigmoid colon (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 7.00 36.84 0.03 43.75 ENST00000582320 lncRNA sigmoid colon (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 1.00 5.26 0.00 100.0 ENST00000582320 lncRNA sigmoid colon (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 1083.00 25.71 5.04 100.0 RPL17-214 retained intron sigmoid colon (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 1624.56 38.56 7.57 56.33 RPL17-214 retained intron sigmoid colon (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 1318.64 31.30 6.14 44.34 RPL17-214 retained intron sigmoid colon (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 53372.00 98.44 248.58 99.85 SNORD43-201 snoRNA sigmoid colon (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 3.00 0.01 0.01 100.0 SNORD43-201 snoRNA sigmoid colon (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 9.00 22.50 0.04 100.0 MIR151B-201 miRNA sigmoid colon (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 75.00 6.22 0.35 100.0 SNORD3A-201 snoRNA sigmoid colon (Tissue)