ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 86.00 5.23 0.40 100.0 ENST00000554988 lncRNA sigmoid colon (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 20.00 0.55 0.09 100.0 SNHG14-220 retained intron sigmoid colon (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 54.00 1.49 0.25 100.0 SNHG14-220 retained intron sigmoid colon (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 3402.00 93.93 15.84 100.0 SNHG14-220 retained intron sigmoid colon (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 657.00 92.93 3.06 100.0 TEKT4P2-201 transcribed unprocessed pseudogene sigmoid colon (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 9630.00 91.49 44.85 97.29 RPL4-202 retained intron sigmoid colon (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 80.00 0.76 0.37 100.0 RPL4-202 retained intron sigmoid colon (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 56.00 0.53 0.26 100.0 RPL4-202 retained intron sigmoid colon (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 45.00 0.43 0.21 100.0 RPL4-202 retained intron sigmoid colon (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 449.00 52.33 2.09 100.0 RPL4-207 retained intron sigmoid colon (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 80.00 9.32 0.37 100.0 RPL4-207 retained intron sigmoid colon (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 58616.00 90.58 273.01 96.26 ENST00000565336 lncRNA sigmoid colon (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 1767.00 2.73 8.23 79.31 ENST00000565336 lncRNA sigmoid colon (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 240.00 21.64 1.12 100.0 RBMX-210 retained intron sigmoid colon (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 350.00 31.56 1.63 100.0 RBMX-210 retained intron sigmoid colon (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 14.00 1.26 0.07 13.21 RBMX-210 retained intron sigmoid colon (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 14.00 12.07 0.07 100.0 RPL4-214 retained intron sigmoid colon (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 5428.34 45.36 25.28 76.42 POLG-DT-202 lncRNA sigmoid colon (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 2296.01 19.19 10.69 32.2 POLG-DT-202 lncRNA sigmoid colon (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 41.00 0.34 0.19 100.0 POLG-DT-202 lncRNA sigmoid colon (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 1347.00 44.93 6.27 100.0 ENST00000570843 lncRNA sigmoid colon (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 258.00 65.32 1.20 100.0 MIR497HG-207 lncRNA sigmoid colon (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 8993.00 98.16 41.89 98.64 MIR22HG-212 lncRNA sigmoid colon (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 46.00 66.67 0.21 74.19 SNORD53B-201 snoRNA sigmoid colon (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 16.00 23.19 0.07 25.81 SNORD53B-201 snoRNA sigmoid colon (Tissue)