ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 3690.00 75.14 17.19 100.0 SNORD69-201 snoRNA sigmoid colon (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 491.00 10.00 2.29 100.0 SNORD69-201 snoRNA sigmoid colon (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 374.00 7.62 1.74 100.0 SNORD69-201 snoRNA sigmoid colon (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 9902.00 67.27 46.12 92.12 B4GALNT2-202 protein coding sigmoid colon (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 60.00 0.41 0.28 100.0 B4GALNT2-202 protein coding sigmoid colon (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 84.00 54.19 0.39 100.0 NDE1-202 protein coding sigmoid colon (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 3.00 42.86 0.01 100.0 MIR450B-201 miRNA sigmoid colon (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 11.00 13.92 0.05 100.0 MIR887-201 miRNA sigmoid colon (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 10.00 71.43 0.05 100.0 MIR889-201 miRNA sigmoid colon (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 7.00 100.00 0.03 100.0 MIR548K-201 miRNA sigmoid colon (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 163.00 72.77 0.76 100.0 MIR320B2-201 miRNA sigmoid colon (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 1.00 100.00 0.00 100.0 MIR1271-201 miRNA sigmoid colon (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 44.00 2.01 0.20 100.0 SNORD100-201 snoRNA sigmoid colon (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 20.00 0.91 0.09 100.0 SNORD100-201 snoRNA sigmoid colon (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 1599.00 73.11 7.45 100.0 SNORD100-201 snoRNA sigmoid colon (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 333.00 15.23 1.55 100.0 SNORD100-201 snoRNA sigmoid colon (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 296.00 68.68 1.38 100.0 SNORD111B-201 snoRNA sigmoid colon (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 218.00 4.33 1.02 100.0 RNU2-36P-201 snRNA sigmoid colon (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 41.00 0.81 0.19 100.0 RNU2-36P-201 snRNA sigmoid colon (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 70.00 0.87 0.33 100.0 SNORD19C-201 snoRNA sigmoid colon (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 7793.00 96.75 36.30 99.83 SNORD19C-201 snoRNA sigmoid colon (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 303.00 73.37 1.41 100.0 SNORD12B-201 snoRNA sigmoid colon (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 14.00 3.39 0.07 100.0 SNORD12B-201 snoRNA sigmoid colon (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 75.00 15.92 0.35 100.0 Y_RNA.609-201 misc RNA sigmoid colon (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 13.00 41.94 0.06 100.0 Y_RNA.612-201 misc RNA sigmoid colon (Tissue)