ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 31.00 6.14 0.14 100.0 MT-TL2-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 355.00 0.07 1.65 100.0 MT-TE-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 372.00 0.07 1.73 85.32 MT-TE-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 954.00 0.19 4.44 67.09 MT-TE-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 447764.00 86.96 2085.48 91.77 MT-TE-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 597.00 0.12 2.78 100.0 MT-TE-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 468.00 0.09 2.18 35.86 MT-TE-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 27.00 0.01 0.13 100.0 MT-TE-201 Mt tRNA sigmoid colon (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 93.00 14.90 0.43 100.0 MT-RNR1-201 Mt rRNA sigmoid colon (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 3.00 60.00 0.01 100.0 MIR454-201 miRNA sigmoid colon (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 27.00 71.05 0.13 100.0 MIR501-201 miRNA sigmoid colon (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 76.00 90.48 0.35 100.0 MIR769-201 miRNA sigmoid colon (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 70.00 66.67 0.33 100.0 KRTAP19-1-201 protein coding sigmoid colon (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 3.00 37.50 0.01 100.0 MIR708-201 miRNA sigmoid colon (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 4.00 100.00 0.02 100.0 MIR301B-201 miRNA sigmoid colon (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 57.00 29.23 0.27 66.28 RNU1-82P-201 snRNA sigmoid colon (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 357.00 16.03 1.66 100.0 SNORD66-201 snoRNA sigmoid colon (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 530.00 23.80 2.47 70.57 SNORD66-201 snoRNA sigmoid colon (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 15.00 0.67 0.07 100.0 SNORD66-201 snoRNA sigmoid colon (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 16.00 64.00 0.07 100.0 U3.17-201 snoRNA sigmoid colon (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 190.00 91.35 0.88 100.0 SNORD17-201 snoRNA sigmoid colon (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 31.00 77.50 0.14 100.0 SNORD72-201 snoRNA sigmoid colon (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 92.00 71.88 0.43 100.0 SNORD70B-201 snoRNA sigmoid colon (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 4497.00 82.86 20.94 95.5 RNY4P18-201 misc RNA sigmoid colon (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 61.00 1.24 0.28 100.0 SNORD69-201 snoRNA sigmoid colon (Tissue)