ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 14.00 7.33 0.08 100.0 MIR500A-201 miRNA sigmoid colon (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 125.00 65.45 0.73 100.0 MIR500A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 402.00 0.60 2.35 100.0 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 13007.00 19.39 76.19 88.53 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 47248.00 70.43 276.75 96.56 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 4104.00 6.12 24.04 100.0 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 1720.00 0.75 10.07 100.0 MIR27B-201 miRNA sigmoid colon (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 210499.00 91.88 1232.96 94.38 MIR27B-201 miRNA sigmoid colon (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 21.00 75.00 0.12 100.0 MIR196A2-201 miRNA sigmoid colon (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 2.00 100.00 0.01 100.0 MIR577-201 miRNA sigmoid colon (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 24.00 64.86 0.14 88.89 MIR654-201 miRNA sigmoid colon (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 183.00 100.00 1.07 100.0 MIR204-201 miRNA sigmoid colon (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 2092.00 93.10 12.25 100.0 MIR152-201 miRNA sigmoid colon (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 7.00 70.00 0.04 100.0 MIR138-1-201 miRNA sigmoid colon (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 2051.00 87.13 12.01 100.0 MIR30C1-201 miRNA sigmoid colon (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 28.00 93.33 0.16 100.0 MIR660-201 miRNA sigmoid colon (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 745.00 10.71 4.36 100.0 MIR125B1-201 miRNA sigmoid colon (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 4698.00 67.55 27.52 83.17 MIR125B1-201 miRNA sigmoid colon (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 1.00 9.09 0.01 100.0 MIR493-201 miRNA sigmoid colon (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 8.00 72.73 0.05 100.0 MIR493-201 miRNA sigmoid colon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 419.06 54.85 2.45 57.96 MIR182-201 miRNA sigmoid colon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 198.76 26.02 1.16 30.53 MIR182-201 miRNA sigmoid colon (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 6747.00 90.58 39.52 92.56 MIR100-201 miRNA sigmoid colon (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 350.00 98.59 2.05 100.0 MIR301A-201 miRNA sigmoid colon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 655.00 8.42 3.84 47.26 MIR130A-201 miRNA sigmoid colon (Tissue)