ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 53.00 86.89 0.31 100.0 MIR194-1-201 miRNA sigmoid colon (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 252.00 78.02 1.48 80.0 MIR128-2-201 miRNA sigmoid colon (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 886.00 82.42 5.19 87.9 MIR99A-201 miRNA sigmoid colon (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 2195.00 0.67 12.86 84.72 MIR28-201 miRNA sigmoid colon (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 293588.00 89.68 1719.64 92.57 MIR28-201 miRNA sigmoid colon (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 3323.00 1.02 19.46 100.0 MIR28-201 miRNA sigmoid colon (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 12.00 75.00 0.07 100.0 MIR183-201 miRNA sigmoid colon (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 2920.00 13.81 17.10 100.0 MIR145-201 miRNA sigmoid colon (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 15120.00 71.51 88.56 100.0 MIR145-201 miRNA sigmoid colon (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 7141.00 98.16 41.83 99.25 MIR186-201 miRNA sigmoid colon (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 8.00 72.73 0.05 100.0 MIR200B-201 miRNA sigmoid colon (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 57.00 33.33 0.33 100.0 MIR218-1-201 miRNA sigmoid colon (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 5415.00 92.41 31.72 95.54 MIR181B2-201 miRNA sigmoid colon (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 1024641.00 87.73 6001.66 88.24 MIR10B-201 miRNA sigmoid colon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 44.15 52.56 0.26 55.18 MIR130B-201 miRNA sigmoid colon (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 3.00 3.57 0.02 100.0 MIR130B-201 miRNA sigmoid colon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 25.30 30.12 0.15 43.62 MIR130B-201 miRNA sigmoid colon (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 1042.00 10.10 6.10 100.0 MIR199A1-201 miRNA sigmoid colon (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 6.00 85.71 0.04 100.0 MIR487B-201 miRNA sigmoid colon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 445.01 36.48 2.61 42.3 MIR93-201 miRNA sigmoid colon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 719.25 58.96 4.21 61.63 MIR93-201 miRNA sigmoid colon (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 349.00 83.49 2.04 90.41 MIR532-201 miRNA sigmoid colon (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 45.00 90.00 0.26 100.0 MIR15B-201 miRNA sigmoid colon (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 104.00 78.20 0.61 100.0 MIR150-201 miRNA sigmoid colon (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 6.00 26.09 0.04 100.0 MIR542-201 miRNA sigmoid colon (Tissue)