ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 16317.00 7.48 95.57 85.53 RNY4-201 misc RNA sigmoid colon (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 3296.00 1.51 19.31 63.64 RNY4-201 misc RNA sigmoid colon (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 5864.00 2.69 34.35 86.34 RNY4-201 misc RNA sigmoid colon (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 50513.00 23.15 295.87 98.05 RNY4-201 misc RNA sigmoid colon (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 959.00 77.40 5.62 82.74 MIR3142HG-201 lncRNA sigmoid colon (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 33175.00 79.28 194.32 89.09 MIR151A-201 miRNA sigmoid colon (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 3924.00 9.38 22.98 100.0 MIR151A-201 miRNA sigmoid colon (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 11156.00 99.64 65.34 100.0 DENND3-221 protein coding sigmoid colon (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 693.00 6.78 4.06 48.33 WDR74-204 protein coding sigmoid colon (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 741.00 7.25 4.34 51.67 WDR74-204 protein coding sigmoid colon (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 123.00 1.20 0.72 100.0 WDR74-204 protein coding sigmoid colon (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 325.00 3.18 1.90 100.0 WDR74-204 protein coding sigmoid colon (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 666.00 6.51 3.90 75.25 WDR74-204 protein coding sigmoid colon (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 292.00 2.86 1.71 100.0 WDR74-204 protein coding sigmoid colon (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 141.00 14.97 0.83 100.0 SCARNA9-201 lncRNA sigmoid colon (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 34174.00 97.93 200.17 100.0 TAF1D-215 retained intron sigmoid colon (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 981294.00 73.88 5747.76 75.37 ENST00000548801 lncRNA sigmoid colon (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 269.00 10.21 1.58 100.0 ENST00000554988 lncRNA sigmoid colon (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 507.00 19.25 2.97 100.0 ENST00000554988 lncRNA sigmoid colon (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 22367.00 92.25 131.01 100.0 SNHG14-220 retained intron sigmoid colon (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 41.00 0.17 0.24 100.0 SNHG14-220 retained intron sigmoid colon (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 573.00 2.36 3.36 100.0 SNHG14-220 retained intron sigmoid colon (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 279.00 1.15 1.63 100.0 SNHG14-220 retained intron sigmoid colon (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 1573.00 99.24 9.21 100.0 TEKT4P2-201 transcribed unprocessed pseudogene sigmoid colon (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 91824.00 95.44 537.84 98.25 RPL4-202 retained intron sigmoid colon (Tissue)