ENCFF590YKZ

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 1064.00 53.71 20.79 92.04 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 244.00 12.32 4.77 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 363.00 17.87 7.09 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 431.00 31.46 8.42 68.09 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 97.00 5.69 1.90 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 1.00 0.83 0.02 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 11.00 9.09 0.21 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 30.00 24.79 0.59 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 59.00 0.34 1.15 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 165.00 51.72 3.22 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 2.00 3.45 0.04 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 3.00 5.17 0.06 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 81.00 11.05 1.58 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 31.00 4.23 0.61 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 3.00 8.57 0.06 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 320.00 81.42 6.25 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 27.00 18.75 0.53 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 29.00 0.49 0.57 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 1.00 0.02 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 205.00 3.43 4.01 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 60.00 1.00 1.17 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 78.00 1.31 1.52 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 138.00 2.31 2.70 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 107.00 0.62 2.09 93.04 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 22.00 0.13 0.43 95.65 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA GM23248 (Cell line)