ENCFF590YKZ

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 8.00 1.69 0.16 100.0 ENST00000753088 lncRNA GM23248 (Cell line)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 21.00 4.43 0.41 100.0 ENST00000753088 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 141.88 4.86 2.77 54.99 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 50.00 1.71 0.98 100.0 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 77.00 2.64 1.50 100.0 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 33.00 1.13 0.64 100.0 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 242.87 8.33 4.75 16.88 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 1300.86 44.60 25.42 88.13 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 35.06 1.20 0.69 22.19 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 70.77 2.43 1.38 38.46 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 11.00 0.38 0.21 100.0 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 176.77 6.06 3.45 87.08 ENST00000756336 lncRNA GM23248 (Cell line)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 247.00 95.00 4.83 100.0 ENST00000756452 lncRNA GM23248 (Cell line)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 12.00 4.96 0.23 100.0 ENST00000760093 lncRNA GM23248 (Cell line)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 1.00 0.41 0.02 100.0 ENST00000760093 lncRNA GM23248 (Cell line)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 11.00 16.67 0.21 100.0 SNHG14-356 lncRNA GM23248 (Cell line)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 568.00 24.85 11.10 89.31 LINC02806-241 lncRNA GM23248 (Cell line)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 185.00 8.09 3.62 100.0 LINC02806-241 lncRNA GM23248 (Cell line)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 18.00 0.79 0.35 100.0 LINC02806-241 lncRNA GM23248 (Cell line)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 304.00 13.30 5.94 66.67 LINC02806-241 lncRNA GM23248 (Cell line)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 163.00 78.37 3.19 100.0 EHBP1-AS1-210 lncRNA GM23248 (Cell line)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 26.00 10.28 0.51 100.0 ENST00000770398 lncRNA GM23248 (Cell line)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 42.00 16.60 0.82 100.0 ENST00000770398 lncRNA GM23248 (Cell line)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 6.00 2.37 0.12 100.0 ENST00000770398 lncRNA GM23248 (Cell line)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 22.00 1.91 0.43 100.0 ENST00000771298 lncRNA GM23248 (Cell line)