ENCFF583SZV

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR573RGL
Description: Part of ENCODE experiment ENCSR573RGL. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 2330.00 1.13 10.02 100.0 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 620.00 0.30 2.67 100.0 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 5532.00 2.69 23.80 100.0 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 5425.80 2.63 23.34 68.97 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 349.00 0.17 1.50 100.0 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 3615.05 1.76 15.55 46.81 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 12427.47 6.03 53.46 40.3 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 647.00 0.31 2.78 100.0 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 7358.00 65.87 31.65 100.0 SNORD114-9-201 snoRNA stomach (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 2822.00 25.26 12.14 100.0 SNORD114-9-201 snoRNA stomach (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 3571.00 27.09 15.36 100.0 Y_RNA.234-201 misc RNA stomach (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 105.00 4.33 0.45 100.0 RNA5SP141-201 rRNA pseudogene stomach (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 727.00 78.85 3.13 100.0 SNORD114-15-201 snoRNA stomach (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 45.00 13.47 0.19 100.0 ENST00000364722 snoRNA stomach (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 253.00 39.47 1.09 100.0 SNORD113-3-201 snoRNA stomach (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 3716.00 75.98 15.98 100.0 SNORD52-201 snoRNA stomach (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 1607.00 19.59 6.91 100.0 SNORD114-3-201 snoRNA stomach (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 5829.00 71.05 25.07 100.0 SNORD114-3-201 snoRNA stomach (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 31.00 0.38 0.13 100.0 SNORD114-3-201 snoRNA stomach (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 35.00 3.21 0.15 100.0 RNA5SP298-201 rRNA pseudogene stomach (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 1270.00 78.69 5.46 100.0 SNORD113-9-201 snoRNA stomach (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 970.00 1.62 4.17 100.0 SNORD38A-201 snoRNA stomach (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 51361.00 86.00 220.92 100.0 SNORD38A-201 snoRNA stomach (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 3972.00 6.65 17.09 100.0 SNORD38A-201 snoRNA stomach (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 14211.00 90.84 61.13 98.34 SNORD114-20-201 snoRNA stomach (Tissue)