ENCFF583SZV

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR573RGL
Description: Part of ENCODE experiment ENCSR573RGL. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 14.00 0.31 0.06 100.0 ENST00000785178 lncRNA stomach (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 94.00 2.25 0.40 49.47 ENST00000786284 lncRNA stomach (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 202.00 4.84 0.87 68.24 ENST00000786284 lncRNA stomach (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1049.00 25.16 4.51 100.0 ENST00000786284 lncRNA stomach (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 3509.64 26.13 15.10 53.31 ENST00000797550 lncRNA stomach (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 4222.00 31.43 18.16 84.68 ENST00000797550 lncRNA stomach (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 3668.32 27.31 15.78 55.72 ENST00000797550 lncRNA stomach (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 91052.00 85.96 391.65 92.69 MIR181A1HG-212 lncRNA stomach (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 81.00 0.08 0.35 100.0 MIR181A1HG-212 lncRNA stomach (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 16.00 35.56 0.07 100.0 C19orf48P-218 lncRNA stomach (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 3124.00 71.70 13.44 93.95 SNHG18-220 lncRNA stomach (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 288.00 17.55 1.24 100.0 ENST00000817026 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 108.80 1.90 0.47 57.26 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 146.00 2.55 0.63 76.04 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 8.00 0.14 0.03 100.0 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 303.40 5.30 1.31 43.16 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 636.41 11.12 2.74 61.19 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 255.84 4.47 1.10 33.14 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 331.97 5.80 1.43 36.16 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 807.63 14.10 3.47 76.12 ENST00000823801 lncRNA stomach (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 2801.00 59.66 12.05 69.66 ENST00000827714 lncRNA stomach (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 1220.00 25.99 5.25 30.34 ENST00000827714 lncRNA stomach (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 269.00 1.16 1.16 100.0 GAS5-377 lncRNA stomach (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 9.00 0.04 0.04 100.0 GAS5-377 lncRNA stomach (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 2337.00 10.11 10.05 100.0 GAS5-377 lncRNA stomach (Tissue)