ENCFF583SZV

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR573RGL
Description: Part of ENCODE experiment ENCSR573RGL. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 1516.00 26.87 6.52 95.05 MIR126-201 miRNA stomach (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 42.00 32.56 0.18 100.0 MIR374A-201 miRNA stomach (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 998.00 85.08 4.29 100.0 MIR31-201 miRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 3000.00 1.44 12.90 56.67 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 1155.27 0.55 4.97 54.55 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 2351.00 1.13 10.11 69.35 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 18.00 0.01 0.08 100.0 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 13.00 0.01 0.06 100.0 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 112.00 0.05 0.48 47.66 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 43.00 0.02 0.18 100.0 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 271.00 0.13 1.17 98.55 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 856.69 0.41 3.68 55.13 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 44.00 0.02 0.19 100.0 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 74.00 0.04 0.32 74.75 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 11603.00 5.55 49.91 83.49 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 287.00 18.91 1.23 100.0 Y_RNA.14-201 misc RNA stomach (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 18.00 23.08 0.08 100.0 RNU5E-1-201 snRNA stomach (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 713.00 24.34 3.07 100.0 SNORA31-201 snoRNA stomach (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 89.00 2.84 0.38 57.79 RNA5SP389-201 rRNA pseudogene stomach (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 204.00 6.50 0.88 100.0 RNA5SP389-201 rRNA pseudogene stomach (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 24.00 0.77 0.10 16.33 RNA5SP389-201 rRNA pseudogene stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 2582.00 9.98 11.11 60.6 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 3444.00 13.31 14.81 65.5 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 630.03 2.44 2.71 68.63 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 5060.00 19.56 21.77 71.99 RNU5A-1-201 snRNA stomach (Tissue)