ENCFF583SZV

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR573RGL
Description: Part of ENCODE experiment ENCSR573RGL. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 309.00 85.83 1.33 88.54 MIR381-201 miRNA stomach (Tissue)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 6134.00 82.19 26.38 91.96 MIR103A2-201 miRNA stomach (Tissue)
ENST00000362155.4 ENST00000362155.4_9_29_+ 9–29 3.00 100.00 0.01 100.0 MIR369-201 miRNA stomach (Tissue)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 91.00 37.92 0.39 100.0 MIR425-201 miRNA stomach (Tissue)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 42.00 17.50 0.18 100.0 MIR425-201 miRNA stomach (Tissue)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 24.00 40.68 0.10 100.0 MIR210-201 miRNA stomach (Tissue)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 41088.00 95.55 176.74 97.12 MIR378A-201 miRNA stomach (Tissue)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 1371.00 68.45 5.90 100.0 MIR361-201 miRNA stomach (Tissue)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 8548.00 93.51 36.77 97.51 MIR101-2-201 miRNA stomach (Tissue)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 199.00 2.18 0.86 47.72 MIR101-2-201 miRNA stomach (Tissue)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 432502.00 99.21 1860.36 99.54 MIR26A1-201 miRNA stomach (Tissue)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 71.00 63.96 0.31 100.0 MIR129-2-201 miRNA stomach (Tissue)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 2101.00 74.06 9.04 100.0 MIR342-201 miRNA stomach (Tissue)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 293618.00 95.07 1262.97 96.11 MIR148A-201 miRNA stomach (Tissue)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 1049.00 0.34 4.51 100.0 MIR148A-201 miRNA stomach (Tissue)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 314.00 92.90 1.35 100.0 MIR410-201 miRNA stomach (Tissue)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 1745.00 88.00 7.51 100.0 MIR409-201 miRNA stomach (Tissue)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 1385.00 98.86 5.96 100.0 MIR411-201 miRNA stomach (Tissue)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 10877.00 93.98 46.79 95.89 MIR26B-201 miRNA stomach (Tissue)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 338.00 54.17 1.45 59.61 MIR148B-201 miRNA stomach (Tissue)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 19010.00 95.56 81.77 97.16 MIRLET7G-201 miRNA stomach (Tissue)
ENST00000362283.1 ENST00000362283.1_6_21_+ 6–21 1068.00 3.91 4.59 100.0 MIR30D-201 miRNA stomach (Tissue)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 15127.00 55.43 65.07 91.07 MIR30D-201 miRNA stomach (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 9384.00 34.39 40.36 86.35 MIR30D-201 miRNA stomach (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 3931.00 69.69 16.91 100.0 MIR126-201 miRNA stomach (Tissue)