ENCFF574WUG

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR634VLA
Description: Part of ENCODE experiment ENCSR634VLA. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 593.00 0.90 4.95 100.0 MIR17HG-214 lncRNA right lobe of liver (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 65.00 0.10 0.54 100.0 MIR17HG-214 lncRNA right lobe of liver (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 134.00 0.20 1.12 100.0 MIR17HG-214 lncRNA right lobe of liver (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 9958.00 4.82 83.06 100.0 SNHG32-223 lncRNA right lobe of liver (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 315.00 0.15 2.63 100.0 SNHG32-223 lncRNA right lobe of liver (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 37.00 0.02 0.31 100.0 SNHG32-223 lncRNA right lobe of liver (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 3726.00 1.80 31.08 65.29 SNHG32-223 lncRNA right lobe of liver (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 189086.00 91.55 1577.15 100.0 SNHG32-223 lncRNA right lobe of liver (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 21451.00 88.30 178.92 98.95 SNHG32-227 lncRNA right lobe of liver (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 1485.00 6.11 12.39 100.0 SNHG32-227 lncRNA right lobe of liver (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 40.00 0.16 0.33 100.0 SNHG32-227 lncRNA right lobe of liver (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 8.00 0.03 0.07 100.0 SNHG32-227 lncRNA right lobe of liver (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 5150.00 82.06 42.96 100.0 B4GALT1-203 nonsense mediated decay right lobe of liver (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 436.00 1.24 3.64 100.0 ENST00000722183 lncRNA right lobe of liver (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 3918.00 11.15 32.68 78.33 ENST00000722183 lncRNA right lobe of liver (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 1766.00 5.03 14.73 100.0 ENST00000722183 lncRNA right lobe of liver (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 4.00 30.77 0.03 100.0 MIR34BHG-202 lncRNA right lobe of liver (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 754.00 68.80 6.29 77.02 THBS3-AS1-228 lncRNA right lobe of liver (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 66.00 75.00 0.55 100.0 MIR200CHG-202 lncRNA right lobe of liver (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 7.00 7.95 0.06 100.0 MIR200CHG-202 lncRNA right lobe of liver (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 1942.00 31.12 16.20 100.0 SNHG16-266 lncRNA right lobe of liver (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 167.00 2.68 1.39 100.0 SNHG16-266 lncRNA right lobe of liver (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 728.00 11.66 6.07 100.0 SNHG16-266 lncRNA right lobe of liver (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 3.00 60.00 0.03 100.0 MEG8-261 lncRNA right lobe of liver (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 148.00 20.56 1.23 100.0 NR2F2-AS1-327 lncRNA right lobe of liver (Tissue)