ENCFF574WUG

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR634VLA
Description: Part of ENCODE experiment ENCSR634VLA. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 58797.00 12.48 490.42 80.79 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 1.00 0.00 0.01 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 461.00 0.10 3.85 86.65 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 38.00 0.01 0.32 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 14.00 0.00 0.12 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 4327.00 0.92 36.09 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 848.00 0.18 7.07 88.24 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 273.76 0.06 2.28 40.98 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 1072.00 0.23 8.94 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 544.00 0.12 4.54 63.04 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1822.00 0.39 15.20 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 54.00 0.01 0.45 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 1782.00 6.68 14.86 100.0 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 242.54 0.91 2.02 91.18 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 58.00 0.22 0.48 100.0 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 64.00 0.24 0.53 100.0 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 10015.00 37.55 83.53 99.93 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 209.00 0.78 1.74 100.0 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 5062.00 18.98 42.22 100.0 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 756.00 2.83 6.31 100.0 SNHG5-273 lncRNA right lobe of liver (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 443.00 0.72 3.70 67.12 MEG8-251 lncRNA right lobe of liver (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 59400.00 95.91 495.45 98.45 MEG8-251 lncRNA right lobe of liver (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 257.00 0.41 2.14 37.41 MEG8-251 lncRNA right lobe of liver (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 236.00 0.38 1.97 94.4 MEG8-251 lncRNA right lobe of liver (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 2.00 0.00 0.02 100.0 MEG8-251 lncRNA right lobe of liver (Tissue)