ENCFF574WUG

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR634VLA
Description: Part of ENCODE experiment ENCSR634VLA. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 9.00 100.00 0.08 100.0 MIR1271-201 miRNA right lobe of liver (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1275.00 7.80 10.63 100.0 SNORD100-201 snoRNA right lobe of liver (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 51.00 0.31 0.43 100.0 SNORD100-201 snoRNA right lobe of liver (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 629.00 3.85 5.25 100.0 SNORD100-201 snoRNA right lobe of liver (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 13257.00 81.07 110.58 100.0 SNORD100-201 snoRNA right lobe of liver (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 3479.00 72.24 29.02 100.0 SNORD111B-201 snoRNA right lobe of liver (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 204.00 2.71 1.70 100.0 RNU2-36P-201 snRNA right lobe of liver (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 436.00 5.80 3.64 100.0 RNU2-36P-201 snRNA right lobe of liver (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 205230.00 97.03 1711.80 99.04 SNORD19C-201 snoRNA right lobe of liver (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 1848.00 0.87 15.41 100.0 SNORD19C-201 snoRNA right lobe of liver (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 10437.00 88.61 87.05 100.0 SNORD12B-201 snoRNA right lobe of liver (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 132.00 1.12 1.10 100.0 SNORD12B-201 snoRNA right lobe of liver (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 1.00 0.06 0.01 100.0 Y_RNA.609-201 misc RNA right lobe of liver (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 577.00 49.74 4.81 100.0 Y_RNA.612-201 misc RNA right lobe of liver (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 377.00 27.14 3.14 100.0 SNORD71-201 snoRNA right lobe of liver (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 204.00 14.69 1.70 100.0 SNORD71-201 snoRNA right lobe of liver (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 71258.00 12.27 594.36 42.98 MIR194-2HG-201 lncRNA right lobe of liver (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 503676.00 86.72 4201.11 95.14 MIR194-2HG-201 lncRNA right lobe of liver (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 37.00 82.22 0.31 100.0 RPS7P15-201 processed pseudogene right lobe of liver (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 25.00 0.59 0.21 100.0 SNORD62B-201 snoRNA right lobe of liver (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 1418.00 33.47 11.83 91.96 SNORD62B-201 snoRNA right lobe of liver (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 444.00 10.48 3.70 100.0 SNORD62B-201 snoRNA right lobe of liver (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 371.00 8.76 3.09 100.0 SNORD62B-201 snoRNA right lobe of liver (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 201.00 93.49 1.68 100.0 MRPL32-203 nonsense mediated decay right lobe of liver (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 2.00 22.22 0.02 100.0 ENST00000436739 lncRNA right lobe of liver (Tissue)