ENCFF574WUG

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR634VLA
Description: Part of ENCODE experiment ENCSR634VLA. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 629.00 66.63 5.25 100.0 KRTAP19-1-201 protein coding right lobe of liver (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 1.00 25.00 0.01 100.0 MIR708-201 miRNA right lobe of liver (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 8.00 100.00 0.07 100.0 MIR509-3-201 miRNA right lobe of liver (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 18.00 100.00 0.15 100.0 MIR301B-201 miRNA right lobe of liver (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 597.00 57.63 4.98 82.8 RNU1-82P-201 snRNA right lobe of liver (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 412.00 2.46 3.44 100.0 SNORD66-201 snoRNA right lobe of liver (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 2961.00 17.68 24.70 100.0 SNORD66-201 snoRNA right lobe of liver (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 5003.00 29.87 41.73 73.97 SNORD66-201 snoRNA right lobe of liver (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 26.00 60.47 0.22 100.0 U3.17-201 snoRNA right lobe of liver (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 4448.00 92.82 37.10 100.0 SNORD17-201 snoRNA right lobe of liver (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 1458.00 75.70 12.16 100.0 SNORD72-201 snoRNA right lobe of liver (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 399.00 72.15 3.33 100.0 SNORD70B-201 snoRNA right lobe of liver (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 731.00 55.72 6.10 83.16 RNY4P18-201 misc RNA right lobe of liver (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 3296.00 12.29 27.49 100.0 SNORD69-201 snoRNA right lobe of liver (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1437.00 5.36 11.99 100.0 SNORD69-201 snoRNA right lobe of liver (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 15465.00 57.67 128.99 100.0 SNORD69-201 snoRNA right lobe of liver (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 3778.00 14.09 31.51 100.0 SNORD69-201 snoRNA right lobe of liver (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 102611.00 88.32 855.87 93.23 B4GALNT2-202 protein coding right lobe of liver (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 323.00 0.28 2.69 100.0 B4GALNT2-202 protein coding right lobe of liver (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 161.00 72.20 1.34 100.0 NDE1-202 protein coding right lobe of liver (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 18.00 94.74 0.15 100.0 MIR450B-201 miRNA right lobe of liver (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 14.00 15.56 0.12 100.0 MIR887-201 miRNA right lobe of liver (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 55.00 94.83 0.46 100.0 MIR889-201 miRNA right lobe of liver (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 37.00 97.37 0.31 100.0 MIR548K-201 miRNA right lobe of liver (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 235.00 63.17 1.96 100.0 MIR320B2-201 miRNA right lobe of liver (Tissue)