ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 892.00 15.81 6.03 100.0 C19orf48P-203 retained intron thyroid gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 69.00 1.22 0.47 100.0 C19orf48P-203 retained intron thyroid gland (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 31149.00 78.82 210.56 80.47 CARMN-209 lncRNA thyroid gland (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 72.00 50.70 0.49 100.0 PPFIA1P1-201 processed pseudogene thyroid gland (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 133.00 43.04 0.90 100.0 SNORD114-21-201 snoRNA thyroid gland (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 113.00 36.57 0.76 100.0 SNORD114-21-201 snoRNA thyroid gland (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 987.00 96.29 6.67 100.0 MIR98-201 miRNA thyroid gland (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 23.00 88.46 0.16 100.0 SNORD113-5-201 snoRNA thyroid gland (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 9.00 60.00 0.06 100.0 MIR15A-201 miRNA thyroid gland (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 121.00 68.36 0.82 100.0 SNHG21-206 retained intron thyroid gland (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 13452.00 48.52 90.93 97.97 MIR486-1-201 miRNA thyroid gland (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 48637.00 89.57 328.77 99.91 NOP56-219 retained intron thyroid gland (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 229.00 0.42 1.55 100.0 NOP56-219 retained intron thyroid gland (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 194.00 0.36 1.31 100.0 NOP56-219 retained intron thyroid gland (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 1683.00 3.10 11.38 54.34 NOP56-219 retained intron thyroid gland (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 3.00 0.02 0.02 100.0 RNA5-8SN2-201 rRNA thyroid gland (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 6170.45 34.15 41.71 50.5 RNA5-8SN2-201 rRNA thyroid gland (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 256.00 1.42 1.73 100.0 RNA5-8SN2-201 rRNA thyroid gland (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 1.00 0.01 0.01 100.0 RNA5-8SN2-201 rRNA thyroid gland (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 6252.07 34.60 42.26 51.17 RNA5-8SN2-201 rRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 294.00 1.90 1.99 100.0 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 31.00 0.20 0.21 26.72 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 2156.00 13.94 14.57 100.0 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 188.00 1.22 1.27 100.0 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 531.00 4.15 3.59 100.0 U2.6-201 snRNA thyroid gland (Tissue)