ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 35.00 0.21 0.24 6.89 ENST00000619323 lncRNA thyroid gland (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 15151.00 92.19 102.42 94.64 ENST00000619323 lncRNA thyroid gland (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 549.00 26.12 3.71 100.0 SCARNA4-202 scaRNA thyroid gland (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 755.00 81.98 5.10 100.0 ENST00000625572 miRNA thyroid gland (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 1074.00 92.99 7.26 100.0 ENST00000630615 snoRNA thyroid gland (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 18.00 26.87 0.12 100.0 DMRT2-209 protein coding thyroid gland (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 1.00 1.49 0.01 100.0 DMRT2-209 protein coding thyroid gland (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 430.00 39.85 2.91 100.0 SNORD98-201 snoRNA thyroid gland (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 337.00 31.23 2.28 100.0 SNORD98-201 snoRNA thyroid gland (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 16462.45 73.93 111.28 76.02 MIR106AHG-201 lncRNA thyroid gland (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 1.73 0.01 0.01 86.55 MIR106AHG-201 lncRNA thyroid gland (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 18.00 13.24 0.12 100.0 MEG8-222 lncRNA thyroid gland (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 74.00 54.41 0.50 100.0 MEG8-222 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 661.00 4.03 4.47 100.0 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 2616.00 15.96 17.68 73.88 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 2431.00 14.83 16.43 72.85 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 2465.40 12.81 16.67 58.12 5S_rRNA.20-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 590.00 11.94 3.99 100.0 HSPA9-211 retained intron thyroid gland (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 2244.00 45.43 15.17 69.15 HSPA9-211 retained intron thyroid gland (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 315.00 61.76 2.13 100.0 DNM3OS-205 lncRNA thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 2282.00 0.18 15.43 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 356.00 0.03 2.41 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 2078.00 0.16 14.05 93.86 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 13.00 0.00 0.09 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 35.00 0.00 0.24 100.0 GAS5-230 retained intron thyroid gland (Tissue)