ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 1384.00 63.08 9.36 100.0 SNORD111B-201 snoRNA thyroid gland (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 252.00 5.65 1.70 100.0 RNU2-36P-201 snRNA thyroid gland (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 199.00 4.46 1.35 100.0 RNU2-36P-201 snRNA thyroid gland (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 506.00 1.18 3.42 100.0 SNORD19C-201 snoRNA thyroid gland (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 41354.00 96.67 279.54 99.09 SNORD19C-201 snoRNA thyroid gland (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 42.00 1.34 0.28 100.0 SNORD12B-201 snoRNA thyroid gland (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 2422.00 77.53 16.37 100.0 SNORD12B-201 snoRNA thyroid gland (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 82.00 34.31 0.55 100.0 Y_RNA.609-201 misc RNA thyroid gland (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 1.00 5.00 0.01 100.0 Y_RNA.612-201 misc RNA thyroid gland (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 740.00 29.92 5.00 100.0 SNORD71-201 snoRNA thyroid gland (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 130.00 5.26 0.88 100.0 SNORD71-201 snoRNA thyroid gland (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 920.00 87.70 6.22 97.05 MIR194-2HG-201 lncRNA thyroid gland (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 112.00 10.68 0.76 43.41 MIR194-2HG-201 lncRNA thyroid gland (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 9.00 0.32 0.06 100.0 SNORD62B-201 snoRNA thyroid gland (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 541.00 19.30 3.66 80.27 SNORD62B-201 snoRNA thyroid gland (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 569.00 20.30 3.85 100.0 SNORD62B-201 snoRNA thyroid gland (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 379.00 13.52 2.56 100.0 SNORD62B-201 snoRNA thyroid gland (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 5.00 83.33 0.03 100.0 MRPL32-203 nonsense mediated decay thyroid gland (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 31.00 88.57 0.21 100.0 ENST00000436739 lncRNA thyroid gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 3169.00 36.47 21.42 93.62 TMEM107-204 protein coding thyroid gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 3.00 0.03 0.02 100.0 TMEM107-204 protein coding thyroid gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 113.00 1.30 0.76 100.0 TMEM107-204 protein coding thyroid gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 3530.00 40.63 23.86 96.77 TMEM107-204 protein coding thyroid gland (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 2212.00 88.16 14.95 100.0 SNHG16-201 lncRNA thyroid gland (Tissue)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 42604.00 85.02 287.99 94.22 SNORD105B-201 snoRNA thyroid gland (Tissue)