ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 402.00 54.69 2.72 83.4 RNU1-82P-201 snRNA thyroid gland (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 1869.00 21.34 12.63 61.28 SNORD66-201 snoRNA thyroid gland (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 1745.00 19.93 11.80 100.0 SNORD66-201 snoRNA thyroid gland (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 213.00 2.43 1.44 100.0 SNORD66-201 snoRNA thyroid gland (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 1.00 50.00 0.01 100.0 U3.17-201 snoRNA thyroid gland (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 1444.00 71.10 9.76 100.0 SNORD17-201 snoRNA thyroid gland (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 363.00 77.23 2.45 100.0 SNORD72-201 snoRNA thyroid gland (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 1601.00 73.27 10.82 100.0 SNORD70B-201 snoRNA thyroid gland (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 1645.00 75.56 11.12 94.87 RNY4P18-201 misc RNA thyroid gland (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 3424.00 13.97 23.15 100.0 SNORD69-201 snoRNA thyroid gland (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 256.00 1.04 1.73 100.0 SNORD69-201 snoRNA thyroid gland (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 3221.00 13.15 21.77 100.0 SNORD69-201 snoRNA thyroid gland (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 15448.00 63.05 104.42 100.0 SNORD69-201 snoRNA thyroid gland (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 2.00 0.20 0.01 0.23 SNORD70-201 snoRNA thyroid gland (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 7628.00 82.12 51.56 93.64 B4GALNT2-202 protein coding thyroid gland (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 25.00 0.27 0.17 100.0 B4GALNT2-202 protein coding thyroid gland (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 27.00 64.29 0.18 100.0 NDE1-202 protein coding thyroid gland (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 2.00 66.67 0.01 100.0 MIR887-201 miRNA thyroid gland (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 2.00 100.00 0.01 100.0 MIR548K-201 miRNA thyroid gland (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 85.00 59.86 0.57 100.0 MIR320B2-201 miRNA thyroid gland (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 4.00 100.00 0.03 100.0 MIR1271-201 miRNA thyroid gland (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 122.00 1.37 0.82 100.0 SNORD100-201 snoRNA thyroid gland (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 4955.00 55.82 33.49 100.0 SNORD100-201 snoRNA thyroid gland (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 2121.00 23.89 14.34 100.0 SNORD100-201 snoRNA thyroid gland (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 736.00 8.29 4.98 100.0 SNORD100-201 snoRNA thyroid gland (Tissue)