ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 287.00 37.03 1.94 61.99 SNORD121B-201 snoRNA thyroid gland (Tissue)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 4.00 0.19 0.03 100.0 SNORD127-201 snoRNA thyroid gland (Tissue)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 1354.00 65.86 9.15 100.0 SNORD127-201 snoRNA thyroid gland (Tissue)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 7576.00 94.42 51.21 100.0 SNORD42B-201 snoRNA thyroid gland (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 53.00 2.37 0.36 100.0 RNY4P25-201 misc RNA thyroid gland (Tissue)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 220.00 79.14 1.49 100.0 SNORD121A-201 snoRNA thyroid gland (Tissue)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 1.00 0.02 0.01 0.21 SNORD126-201 snoRNA thyroid gland (Tissue)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 5180.00 97.31 35.02 99.98 SNORD126-201 snoRNA thyroid gland (Tissue)
ENST00000461448.6 ENST00000461448.6_522_587_+ 522–587 817.00 46.18 5.52 100.0 SNHG12-201 retained intron thyroid gland (Tissue)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 801.00 96.39 5.41 100.0 SMC1A-204 retained intron thyroid gland (Tissue)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 253.00 17.74 1.71 100.0 DDX39B-219 retained intron thyroid gland (Tissue)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 476.00 33.38 3.22 100.0 DDX39B-219 retained intron thyroid gland (Tissue)
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 1085.00 78.91 7.33 100.0 RPS8-206 protein coding CDS not defined thyroid gland (Tissue)
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 2457.00 18.27 16.61 99.47 RPL13-207 retained intron thyroid gland (Tissue)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 4284.00 31.86 28.96 100.0 RPL13-207 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 3749.00 1.55 25.34 85.55 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 37871.00 15.67 256.00 86.02 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 5.00 0.00 0.03 100.0 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 177038.00 73.27 1196.72 99.14 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 1088.00 0.45 7.35 44.72 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 7.00 0.00 0.05 100.0 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 6854.00 2.84 46.33 59.06 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 370.00 0.15 2.50 45.85 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 2035.00 0.84 13.76 51.26 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 103.00 0.04 0.70 39.31 EIF4A2-219 retained intron thyroid gland (Tissue)