ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 2.00 0.10 0.01 100.0 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 117.00 5.82 0.58 77.48 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 272.00 24.20 1.36 100.0 SNHG10-212 lncRNA uterus (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 1971.00 79.89 9.83 100.0 MIR222HG-206 lncRNA uterus (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 270.00 10.94 1.35 75.84 MIR222HG-206 lncRNA uterus (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 5.00 0.20 0.02 100.0 MIR222HG-206 lncRNA uterus (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 64.00 34.97 0.32 100.0 RPSA-216 retained intron uterus (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 1571.00 3.06 7.84 74.49 MIR99AHG-370 lncRNA uterus (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 47930.00 93.29 239.13 97.83 MIR99AHG-370 lncRNA uterus (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 63.00 98.44 0.31 100.0 HPS4-237 retained intron uterus (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 27.00 96.43 0.13 100.0 MEG8-253 lncRNA uterus (Tissue)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 3.00 1.99 0.01 100.0 MEG9-206 lncRNA uterus (Tissue)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 62.00 41.06 0.31 100.0 MEG9-206 lncRNA uterus (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 72.00 12.83 0.36 100.0 DNAJC5-203 nonsense mediated decay uterus (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 423.00 19.22 2.11 100.0 ENST00000707189 TEC uterus (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 6554.79 19.17 32.70 21.17 MIR17HG-214 lncRNA uterus (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 16.00 0.05 0.08 100.0 MIR17HG-214 lncRNA uterus (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 26019.15 76.10 129.81 78.24 MIR17HG-214 lncRNA uterus (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 233.00 0.68 1.16 100.0 MIR17HG-214 lncRNA uterus (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 51.00 0.15 0.25 100.0 MIR17HG-214 lncRNA uterus (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 18.00 0.05 0.09 100.0 MIR17HG-214 lncRNA uterus (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 29.00 0.08 0.14 100.0 MIR17HG-214 lncRNA uterus (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 3725.00 3.57 18.58 100.0 SNHG32-223 lncRNA uterus (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 234.00 0.22 1.17 100.0 SNHG32-223 lncRNA uterus (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 32.00 0.03 0.16 100.0 SNHG32-223 lncRNA uterus (Tissue)