ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 651.00 0.06 3.25 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 2087.00 0.19 10.41 60.69 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1515.00 0.14 7.56 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 240.00 0.02 1.20 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 3.00 0.00 0.01 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 5151.00 17.23 25.70 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 262.60 0.88 1.31 85.54 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 1203.00 4.02 6.00 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 509.00 1.70 2.54 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 32.07 0.11 0.16 10.45 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 8768.00 29.33 43.74 99.97 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 820.00 2.74 4.09 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 1204.00 4.03 6.01 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 953.00 3.19 4.75 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 1342.00 0.52 6.70 58.63 MEG8-251 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 240195.00 92.69 1198.35 99.29 MEG8-251 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 1101.00 0.42 5.49 46.2 MEG8-251 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 11016.00 4.25 54.96 92.0 MEG8-251 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 2.00 0.00 0.01 100.0 MEG8-251 lncRNA uterus (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 4.00 0.27 0.02 100.0 SNHG14-336 lncRNA uterus (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 103.00 24.29 0.51 100.0 FMN2-209 protein coding CDS not defined uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 67.00 3.33 0.33 100.0 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 34.00 1.69 0.17 22.52 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 73.00 3.63 0.36 100.0 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 136.00 6.77 0.68 100.0 LINC02739-203 lncRNA uterus (Tissue)