ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 2001.00 1.92 9.98 78.16 SNHG32-223 lncRNA uterus (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 96908.00 92.95 483.48 100.0 SNHG32-223 lncRNA uterus (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 20866.00 92.09 104.10 99.04 SNHG32-227 lncRNA uterus (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 824.00 3.64 4.11 100.0 SNHG32-227 lncRNA uterus (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 25.00 0.11 0.12 100.0 SNHG32-227 lncRNA uterus (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 11.00 0.05 0.05 100.0 SNHG32-227 lncRNA uterus (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 671.00 83.77 3.35 100.0 B4GALT1-203 nonsense mediated decay uterus (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 364.00 14.93 1.82 100.0 ENST00000722183 lncRNA uterus (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 204.00 8.37 1.02 89.87 ENST00000722183 lncRNA uterus (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 23.00 0.94 0.11 100.0 ENST00000722183 lncRNA uterus (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 2.00 28.57 0.01 100.0 MIR34BHG-202 lncRNA uterus (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 4837.00 80.99 24.13 84.7 THBS3-AS1-228 lncRNA uterus (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 2.00 25.00 0.01 100.0 MIR200CHG-202 lncRNA uterus (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 1.00 12.50 0.00 100.0 MIR200CHG-202 lncRNA uterus (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 749.00 24.60 3.74 100.0 SNHG16-266 lncRNA uterus (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 121.00 3.97 0.60 100.0 SNHG16-266 lncRNA uterus (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 407.00 13.37 2.03 100.0 SNHG16-266 lncRNA uterus (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 24.00 26.37 0.12 100.0 NR2F2-AS1-327 lncRNA uterus (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 97.00 3.23 0.48 47.32 ENST00000747675 lncRNA uterus (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 1030.00 34.34 5.14 100.0 ENST00000747675 lncRNA uterus (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 61.00 2.03 0.30 38.61 ENST00000747675 lncRNA uterus (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 47.00 1.57 0.23 32.64 ENST00000747675 lncRNA uterus (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 499.00 16.64 2.49 100.0 ENST00000747675 lncRNA uterus (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 16002.00 23.16 79.83 96.04 SNHG26-250 lncRNA uterus (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 48448.00 70.13 241.71 100.0 SNHG26-250 lncRNA uterus (Tissue)