ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 239.00 3.38 1.19 100.0 SNHG14-234 lncRNA uterus (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 16.00 0.23 0.08 100.0 SNHG14-234 lncRNA uterus (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 4135.00 25.23 20.63 100.0 ENST00000655317 lncRNA uterus (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 5274.00 32.18 26.31 74.33 ENST00000655317 lncRNA uterus (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 263.00 1.29 1.31 75.79 LINC01962-202 lncRNA uterus (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 18854.00 92.56 94.06 100.0 LINC01962-202 lncRNA uterus (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 285.00 1.40 1.42 100.0 LINC01962-202 lncRNA uterus (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 15531.00 92.83 77.49 100.0 MEG8-228 lncRNA uterus (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 20.00 0.69 0.10 100.0 LIMD1-AS1-204 lncRNA uterus (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 474.00 16.47 2.36 95.18 LIMD1-AS1-204 lncRNA uterus (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 3640.00 53.71 18.16 83.09 MIR99AHG-262 lncRNA uterus (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1647.00 24.30 8.22 100.0 MIR99AHG-262 lncRNA uterus (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 99.00 75.57 0.49 90.0 MIR9-2HG-225 lncRNA uterus (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 744.00 39.60 3.71 100.0 MEG8-233 lncRNA uterus (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 396.00 21.08 1.98 100.0 MEG8-233 lncRNA uterus (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 2529.00 57.04 12.62 100.0 MEG8-234 lncRNA uterus (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 631.00 14.23 3.15 100.0 MEG8-234 lncRNA uterus (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 266.00 58.59 1.33 100.0 MEG8-240 lncRNA uterus (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 6.00 33.33 0.03 100.0 SNHG14-306 lncRNA uterus (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 6.00 3.82 0.03 100.0 ENST00000666735 lncRNA uterus (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 4404.00 89.01 21.97 100.0 MEG8-242 lncRNA uterus (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 293.00 0.20 1.46 100.0 MEG8-244 lncRNA uterus (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 304.00 0.21 1.52 100.0 MEG8-244 lncRNA uterus (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 143490.00 98.88 715.88 99.86 MEG8-244 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 701.00 0.06 3.50 100.0 SNHG1-248 lncRNA uterus (Tissue)