ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 79.00 0.79 0.39 44.63 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 117.00 1.17 0.58 92.13 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 6155.00 61.30 30.71 86.67 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 98.00 0.98 0.49 55.37 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 1974.00 19.66 9.85 54.74 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 279.00 2.78 1.39 100.0 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 469.00 4.67 2.34 100.0 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 49.00 0.49 0.24 100.0 CTC1-214 protein coding uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 457.00 1.41 2.28 65.1 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 3294.00 10.20 16.43 93.05 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 71.00 0.22 0.35 100.0 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 955.00 2.96 4.76 53.8 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 15.00 0.05 0.07 100.0 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 48.00 0.15 0.24 100.0 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 1.00 0.00 0.00 100.0 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 24.00 0.07 0.12 100.0 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 2948.00 9.13 14.71 39.44 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 92.00 0.28 0.46 100.0 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 17995.00 55.72 89.78 89.7 ENST00000651540 lncRNA uterus (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 1865.00 0.54 9.30 100.0 MIRLET7A1HG-203 lncRNA uterus (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 3893.00 96.48 19.42 100.0 MEG8-225 lncRNA uterus (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 2818.00 79.18 14.06 100.0 SNHG29-232 lncRNA uterus (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 368.00 10.34 1.84 100.0 SNHG29-232 lncRNA uterus (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 9.00 0.25 0.04 100.0 SNHG29-232 lncRNA uterus (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 2.00 0.06 0.01 100.0 SNHG29-232 lncRNA uterus (Tissue)