ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 5532.00 0.32 27.60 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 257.00 0.01 1.28 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 2005.00 0.11 10.00 84.71 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 11.00 0.00 0.05 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 28.00 0.00 0.14 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 794.00 0.05 3.96 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 912558.00 52.01 4552.81 99.86 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 482.00 0.03 2.40 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 2715.00 0.15 13.55 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 280.00 0.02 1.40 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 355.00 0.02 1.77 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 1092.00 0.06 5.45 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 3.00 0.00 0.01 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 405.00 0.02 2.02 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 1382.00 0.08 6.89 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 11099.00 0.63 55.37 84.85 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 4862.00 0.28 24.26 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 2.00 0.00 0.01 40.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 219.00 0.01 1.09 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 132.00 0.01 0.66 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 1506.00 0.09 7.51 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 785805.00 44.78 3920.43 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 1.00 0.00 0.00 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 27.00 11.25 0.13 100.0 FTX-219 lncRNA uterus (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 87.00 36.25 0.43 85.29 FTX-219 lncRNA uterus (Tissue)