ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 578.00 7.54 2.88 100.0 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 116.00 1.51 0.58 100.0 U2.3-201 snRNA uterus (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 272.00 3.81 1.36 100.0 U2.6-201 snRNA uterus (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 30.00 0.18 0.15 15.08 ENST00000619323 lncRNA uterus (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 15805.00 96.18 78.85 97.42 ENST00000619323 lncRNA uterus (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 254.00 25.27 1.27 100.0 SCARNA4-202 scaRNA uterus (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 728.00 84.26 3.63 100.0 ENST00000625572 miRNA uterus (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 593.00 92.80 2.96 100.0 ENST00000630615 snoRNA uterus (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 70.00 53.85 0.35 100.0 DMRT2-209 protein coding uterus (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 2.00 1.54 0.01 100.0 DMRT2-209 protein coding uterus (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 467.00 37.63 2.33 100.0 SNORD98-201 snoRNA uterus (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 357.00 28.77 1.78 100.0 SNORD98-201 snoRNA uterus (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 26171.07 78.36 130.57 80.39 MIR106AHG-201 lncRNA uterus (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 1.73 0.01 0.01 57.7 MIR106AHG-201 lncRNA uterus (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 1.00 0.00 0.00 100.0 MIR106AHG-201 lncRNA uterus (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 2.56 0.01 0.01 85.2 MIR106AHG-201 lncRNA uterus (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 130.00 15.72 0.65 100.0 MEG8-222 lncRNA uterus (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 388.00 46.92 1.94 100.0 MEG8-222 lncRNA uterus (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 164.00 2.65 0.82 100.0 SNHG14-224 lncRNA uterus (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 1308.00 21.13 6.53 83.15 SNHG14-224 lncRNA uterus (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 513.00 8.29 2.56 56.81 SNHG14-224 lncRNA uterus (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 767.80 10.35 3.83 55.92 5S_rRNA.20-201 rRNA pseudogene uterus (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 174.00 5.11 0.87 100.0 HSPA9-211 retained intron uterus (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1322.00 38.79 6.60 59.1 HSPA9-211 retained intron uterus (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 1937.00 61.63 9.66 100.0 DNM3OS-205 lncRNA uterus (Tissue)