ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 2.00 10.53 0.01 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 3352.00 15.34 13.89 88.96 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 53.00 0.24 0.22 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 7213.00 33.02 29.89 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 472.00 21.02 1.96 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 110.00 0.02 0.46 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 2136.00 0.30 8.85 87.54 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 285.00 0.04 1.18 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 1013.00 0.14 4.20 97.22 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 124108.00 17.64 514.31 46.43 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 24.00 0.00 0.10 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 1273.00 85.15 5.28 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 182.00 0.01 0.75 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 1109.00 19.50 4.60 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 1449.00 25.48 6.00 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 787.00 11.32 3.26 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 174.00 0.63 0.72 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 65.00 0.00 0.27 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 824.00 0.03 3.41 27.16 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 7058.00 37.44 29.25 56.22 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 8278.00 43.92 34.30 53.98 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 7.00 0.26 0.03 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 562.00 0.08 2.33 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 473781.00 67.34 1963.39 91.44 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 1729.00 44.62 7.17 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA spleen (Tissue)