ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 1383.02 1.32 5.73 44.38 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 908.74 0.87 3.77 38.77 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 1762.33 1.68 7.30 41.54 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 10297.00 9.84 42.67 79.16 SNHG25-206 lncRNA spleen (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 463.00 0.44 1.92 100.0 SNHG25-206 lncRNA spleen (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 6673.00 81.18 27.65 84.63 MIR155HG-205 lncRNA spleen (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 21.00 0.39 0.09 100.0 ENST00000785178 lncRNA spleen (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 123.00 4.04 0.51 92.48 ENST00000786284 lncRNA spleen (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 928.00 30.52 3.85 100.0 ENST00000786284 lncRNA spleen (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 10.00 0.33 0.04 16.67 ENST00000786284 lncRNA spleen (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 6676.81 31.58 27.67 61.94 ENST00000797550 lncRNA spleen (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 5798.15 27.42 24.03 53.79 ENST00000797550 lncRNA spleen (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 3119.00 14.75 12.93 52.1 ENST00000797550 lncRNA spleen (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 237937.00 80.19 986.03 90.5 MIR181A1HG-212 lncRNA spleen (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 632.00 0.21 2.62 100.0 MIR181A1HG-212 lncRNA spleen (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 96.00 47.29 0.40 100.0 C19orf48P-218 lncRNA spleen (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 516.00 58.64 2.14 95.2 SNHG18-220 lncRNA spleen (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 1065.00 28.79 4.41 100.0 ENST00000817026 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 6.00 0.05 0.02 100.0 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 411.87 3.11 1.71 12.34 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 243.69 1.84 1.01 63.13 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 2617.49 19.76 10.85 71.3 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 283.67 2.14 1.18 8.26 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 279.00 2.11 1.16 80.4 ENST00000823279 lncRNA spleen (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 603.74 4.56 2.50 20.55 ENST00000823279 lncRNA spleen (Tissue)