ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 173.00 27.68 0.72 100.0 DMRT2-209 protein coding spleen (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 2814.00 59.28 11.66 100.0 SNORD98-201 snoRNA spleen (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 789.00 16.62 3.27 100.0 SNORD98-201 snoRNA spleen (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 95266.20 70.05 394.79 75.05 MIR106AHG-201 lncRNA spleen (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 16.44 0.01 0.07 25.3 MIR106AHG-201 lncRNA spleen (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 2.00 0.00 0.01 100.0 MIR106AHG-201 lncRNA spleen (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 42.60 0.03 0.18 65.54 MIR106AHG-201 lncRNA spleen (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 171.00 29.95 0.71 100.0 MEG8-222 lncRNA spleen (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 142.00 24.87 0.59 100.0 MEG8-222 lncRNA spleen (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 82.00 2.99 0.34 100.0 SNHG14-224 lncRNA spleen (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 423.00 15.45 1.75 72.68 SNHG14-224 lncRNA spleen (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 314.00 11.47 1.30 72.52 SNHG14-224 lncRNA spleen (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 11949.94 10.68 49.52 50.61 5S_rRNA.20-201 rRNA pseudogene spleen (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 574.00 6.87 2.38 100.0 HSPA9-211 retained intron spleen (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 3468.00 41.50 14.37 65.09 HSPA9-211 retained intron spleen (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 7613.00 71.44 31.55 100.0 DNM3OS-205 lncRNA spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 2556.00 0.43 10.59 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 1075.00 0.18 4.45 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 6759.00 1.14 28.01 95.24 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 117.00 0.02 0.48 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 239.00 0.04 0.99 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 290.00 0.05 1.20 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 365390.00 61.63 1514.21 99.88 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1597.00 0.27 6.62 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 13908.00 2.35 57.64 100.0 GAS5-230 retained intron spleen (Tissue)