ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 25.00 92.59 0.10 100.0 MIR376C-201 miRNA spleen (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 534.00 38.06 2.21 100.0 SNHG21-206 retained intron spleen (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 685114.00 48.30 2839.18 97.51 MIR486-1-201 miRNA spleen (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 10328.00 49.62 42.80 100.0 NOP56-219 retained intron spleen (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 626.00 3.01 2.59 100.0 NOP56-219 retained intron spleen (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 1154.00 5.54 4.78 100.0 NOP56-219 retained intron spleen (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 2781.00 13.36 11.52 54.16 NOP56-219 retained intron spleen (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 5760.02 36.47 23.87 44.94 RNA5-8SN2-201 rRNA spleen (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 4.00 0.03 0.02 100.0 RNA5-8SN2-201 rRNA spleen (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 417.00 2.64 1.73 100.0 RNA5-8SN2-201 rRNA spleen (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 4.00 0.03 0.02 100.0 RNA5-8SN2-201 rRNA spleen (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 6757.98 42.79 28.01 52.73 RNA5-8SN2-201 rRNA spleen (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 3.00 100.00 0.01 100.0 MIR376A1-201 miRNA spleen (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 1290.00 2.81 5.35 100.0 U2.3-201 snRNA spleen (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 25.00 0.05 0.10 20.83 U2.3-201 snRNA spleen (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 12.00 0.03 0.05 100.0 U2.3-201 snRNA spleen (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 671.00 1.46 2.78 100.0 U2.3-201 snRNA spleen (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 2319.00 5.05 9.61 100.0 U2.3-201 snRNA spleen (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 3341.00 7.04 13.85 100.0 U2.6-201 snRNA spleen (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 203.00 0.26 0.84 12.86 ENST00000619323 lncRNA spleen (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 74690.00 95.99 309.52 97.39 ENST00000619323 lncRNA spleen (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 1748.00 31.20 7.24 100.0 SCARNA4-202 scaRNA spleen (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 1366.00 69.27 5.66 100.0 ENST00000625572 miRNA spleen (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 2675.00 87.05 11.09 100.0 ENST00000630615 snoRNA spleen (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 235.00 37.60 0.97 100.0 DMRT2-209 protein coding spleen (Tissue)