ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 513.00 84.24 2.13 100.0 NDE1-202 protein coding spleen (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 19.00 86.36 0.08 100.0 MIR450B-201 miRNA spleen (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 41.00 34.75 0.17 100.0 MIR887-201 miRNA spleen (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 151.00 93.21 0.63 100.0 MIR889-201 miRNA spleen (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 64.00 82.05 0.27 100.0 MIR548K-201 miRNA spleen (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 336.00 63.28 1.39 100.0 MIR320B2-201 miRNA spleen (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 2.00 66.67 0.01 100.0 MIR1271-201 miRNA spleen (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 1158.00 4.07 4.80 100.0 SNORD100-201 snoRNA spleen (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1916.00 6.74 7.94 100.0 SNORD100-201 snoRNA spleen (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 217.00 0.76 0.90 100.0 SNORD100-201 snoRNA spleen (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 22899.00 80.52 94.90 100.0 SNORD100-201 snoRNA spleen (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 7201.00 74.04 29.84 100.0 SNORD111B-201 snoRNA spleen (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 1002.00 1.83 4.15 100.0 RNU2-36P-201 snRNA spleen (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 2078.00 3.79 8.61 100.0 RNU2-36P-201 snRNA spleen (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 2501.00 2.37 10.36 100.0 SNORD19C-201 snoRNA spleen (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 100354.00 95.09 415.88 99.19 SNORD19C-201 snoRNA spleen (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 150.00 1.60 0.62 100.0 SNORD12B-201 snoRNA spleen (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 7367.00 78.66 30.53 100.0 SNORD12B-201 snoRNA spleen (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 13.00 1.65 0.05 100.0 Y_RNA.609-201 misc RNA spleen (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 74.00 49.66 0.31 100.0 Y_RNA.612-201 misc RNA spleen (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 623.00 25.63 2.58 100.0 SNORD71-201 snoRNA spleen (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 320.00 13.16 1.33 100.0 SNORD71-201 snoRNA spleen (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 9889.00 87.02 40.98 96.4 MIR194-2HG-201 lncRNA spleen (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 1348.00 11.86 5.59 54.35 MIR194-2HG-201 lncRNA spleen (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 16.00 84.21 0.07 100.0 RPS7P15-201 processed pseudogene spleen (Tissue)