ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 18.00 43.90 0.07 100.0 MIR196A1-201 miRNA spleen (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 3711.00 67.23 15.38 100.0 MT-RNR1-201 Mt rRNA spleen (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 154.00 72.99 0.64 100.0 MIR454-201 miRNA spleen (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 116.00 48.33 0.48 100.0 MIR501-201 miRNA spleen (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 557.00 92.37 2.31 100.0 MIR769-201 miRNA spleen (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 298.00 74.87 1.23 100.0 KRTAP19-1-201 protein coding spleen (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 2.00 11.76 0.01 100.0 MIR708-201 miRNA spleen (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 14.00 73.68 0.06 100.0 MIR509-3-201 miRNA spleen (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 6.00 75.00 0.02 100.0 MIR543-201 miRNA spleen (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 4.00 57.14 0.02 100.0 MIR301B-201 miRNA spleen (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 1432.00 63.25 5.93 80.18 RNU1-82P-201 snRNA spleen (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 1988.00 9.82 8.24 100.0 SNORD66-201 snoRNA spleen (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 6520.00 32.20 27.02 65.51 SNORD66-201 snoRNA spleen (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 251.00 1.24 1.04 100.0 SNORD66-201 snoRNA spleen (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 40.00 34.48 0.17 100.0 U3.17-201 snoRNA spleen (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 9420.00 94.82 39.04 100.0 SNORD17-201 snoRNA spleen (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 608.00 66.89 2.52 100.0 SNORD72-201 snoRNA spleen (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 320.00 64.65 1.33 100.0 SNORD70B-201 snoRNA spleen (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 3724.00 65.38 15.43 92.18 RNY4P18-201 misc RNA spleen (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 18997.00 45.95 78.73 100.0 SNORD69-201 snoRNA spleen (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 8892.00 21.51 36.85 100.0 SNORD69-201 snoRNA spleen (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 7555.00 18.27 31.31 100.0 SNORD69-201 snoRNA spleen (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1591.00 3.85 6.59 100.0 SNORD69-201 snoRNA spleen (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 256.00 0.56 1.06 100.0 B4GALNT2-202 protein coding spleen (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 39350.00 86.84 163.07 92.41 B4GALNT2-202 protein coding spleen (Tissue)