ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 2626.31 24.52 26.66 70.26 RNY1-201 misc RNA OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 596.89 1.62 6.06 13.48 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 1251.00 3.40 12.70 100.0 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 806.99 2.19 8.19 33.15 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 1835.00 4.99 18.63 100.0 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 1554.46 4.23 15.78 60.7 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 75.00 0.20 0.76 100.0 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 218.00 0.59 2.21 100.0 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 759.00 2.06 7.70 100.0 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 102.00 0.28 1.04 100.0 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 29937.00 79.23 303.89 100.0 Y_RNA.234-201 misc RNA OCI-LY7 (Cell line)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 14.00 0.02 0.14 100.0 RNA5S9-201 rRNA OCI-LY7 (Cell line)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 2219.00 6.55 22.53 100.0 RNA5SP141-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 316.00 78.61 3.21 100.0 ENST00000364722 snoRNA OCI-LY7 (Cell line)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 3594.00 71.68 36.48 100.0 SNORD52-201 snoRNA OCI-LY7 (Cell line)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 497.00 26.72 5.05 40.05 SNORD117-201 snoRNA OCI-LY7 (Cell line)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 754.00 40.54 7.65 60.27 SNORD117-201 snoRNA OCI-LY7 (Cell line)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 2.00 0.03 0.02 100.0 RNA5SP298-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 184.00 1.45 1.87 100.0 SNORD38A-201 snoRNA OCI-LY7 (Cell line)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 11174.00 87.80 113.43 100.0 SNORD38A-201 snoRNA OCI-LY7 (Cell line)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 564.00 4.43 5.73 100.0 SNORD38A-201 snoRNA OCI-LY7 (Cell line)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 9292.00 6.25 94.32 96.92 7SK.1-201 misc RNA OCI-LY7 (Cell line)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 21.00 0.01 0.21 100.0 7SK.1-201 misc RNA OCI-LY7 (Cell line)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 35691.00 24.01 362.30 85.37 7SK.1-201 misc RNA OCI-LY7 (Cell line)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 6509.00 4.38 66.07 100.0 7SK.1-201 misc RNA OCI-LY7 (Cell line)